Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02090-4

https://doi.org/10.1186/s13059-020-02090-4

Producing polished prokaryotic pangenomes with the Panaroo pipeline

Cited by: 327
Author(s): Gerry Tonkin‐Hill, Neil MacAlasdair, Christopher Ruis, Aaron Weimann, Gal Horesh, John A. Lees, Rebecca A. Gladstone, Stephanie Lo, Christopher Beaudoin, R. Andres Floto, Simon D. W. Frost, Jukka Corander, Stephen D. Bentley, Julian Parkhill
Published: over 4 years ago

Software Mentions 3

cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
pypi: edlib
Lightweight, super fast library for sequence alignment using edit (Levenshtein) distance.
Papers that mentioned: 11
pypi: pyseer
Papers that mentioned: 17