Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02038-8

https://doi.org/10.1186/s13059-020-02038-8

Personalized and graph genomes reveal missing signal in epigenomic data

Cited by: 25
Author(s): Cristian Groza, Tony Kwan, Nicole Soranzo, Tomi Pastinen, Guillaume Bourque
Published: over 4 years ago

Software Mentions 8

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
pypi: c
Android battery history analyZer
Papers that mentioned: 28
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: picard
The next generation MusicBrainz tagger
Papers that mentioned: 243
pypi: vg
Linear algebra for humans: a very good vector-geometry and linear-algebra toolbelt
Papers that mentioned: 34