Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02034-y

https://doi.org/10.1186/s13059-020-02034-y

Cited by: 11
Author(s): Bin Li, Young Li, Kun Li, Lianbang Zhu, Qiaoni Yu, Pengfei Cai, Jingwen Fang, Wen Zhang, Pengcheng Du, Chen Jiang, Jun Lin, Kun Qu
Published: about 4 years ago

Software Mentions 10

bioconductor: chromVAR

Chromatin Variation Across Regions
Papers that mentioned: 46

bioconductor: SC3

Single-Cell Consensus Clustering
Papers that mentioned: 71

bioconductor: SIMLR

Single-cell Interpretation via Multi-kernel LeaRning (SIMLR)
Papers that mentioned: 40

cran: ROSE

Random Over-Sampling Examples
Papers that mentioned: 131

cran: Seurat

Tools for Single Cell Genomics
Papers that mentioned: 1,512

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

pypi: APEC

Single cell epigenomic clustering based on accessibility pattern
Papers that mentioned: 9

pypi: browser

A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125

pypi: MACS2

Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203

pypi: SIMLR

Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning
Papers that mentioned: 40