Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1906-x

https://doi.org/10.1186/s13059-019-1906-x

scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation

Cited by: 257
Author(s): Elo Madissoon, Anna Wilbrey-Clark, Ricardo J. Miragaia, Kourosh Saeb‐Parsy, Krishnaa Mahbubani, Nikitas Georgakopoulos, Philippa Harding, Krzysztof Polański, Ni Huang, Karol Nowicki-Osuch, Rebecca C. Fitzgerald, Kevin Loudon, John R. Ferdinand, Menna R. Clatworthy, Anthi Tsingene, Stijn van Dongen, Monika Dąbrowska, Minal Patel, Michael J T Stubbington, Sarah A. Teichmann, Oliver Stegle, Kerstin B. Meyer
Published: almost 5 years ago

Software Mentions 5

bioconductor: scater
Single-Cell Analysis Toolkit for Gene Expression Data in R
Papers that mentioned: 79
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq data
Papers that mentioned: 34
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34