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Papers: 10.1186/s13059-019-1891-0

https://doi.org/10.1186/s13059-019-1891-0

Improved metagenomic analysis with Kraken 2

Cited by: 2,359
Author(s): Derrick E. Wood, Jennifer Lu, Ben Langmead
Published: over 5 years ago

Software Mentions 3

cran: mason
Build Data Structures for Common Statistical Analysis
Papers that mentioned: 6
Very Likely Science (85)
pypi: mason
Python SQL query generation without the ORM.
Papers that mentioned: 6
Very Likely Science (65)
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306
Very Likely Science (100)