Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1877-y

https://doi.org/10.1186/s13059-019-1877-y

Chromatin interactome mapping at 139 independent breast cancer risk signals

Cited by: 22
Author(s): Jonathan Beesley, Haran Sivakumaran, Mahdi Moradi Marjaneh, Luize Gonçalves Lima, Kristine M. Hillman, Susanne Kaufmann, Natasha Tuano, Nehal Hussein, Sunyoung Ham, Pamela Mukhopadhyay, Stephen H. Kazakoff, Jason S. Lee, Kyriaki Michailidou, Daniel R. Barnes, Antonis C. Antoniou, Laura Fachal, Alison M. Dunning, Douglas F. Easton, Nicola Waddell, Joseph Rosenbluh, Andreas Möller, Georgia Chenevix-Trench, Juliet D. French, Stacey L. Edwards
Published: almost 5 years ago

Software Mentions 3

cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
pypi: heatmap
Module to create heatmaps
Papers that mentioned: 285
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203