Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-019-1706-3
https://doi.org/10.1186/s13059-019-1706-3
ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C
Cited by: 25
Author(s): Yousra Ben Zouari, Anne Molitor, Natalia Sikorska, Véra Pancaldi, Tom Sexton
Published: over 5 years ago
Software Mentions 4
bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSetPapers that mentioned: 1,962
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323