Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-019-1654-y

https://doi.org/10.1186/s13059-019-1654-y

Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling

Cited by: 68
Author(s): Aslihan Karabacak Calviello, Antje Hirsekorn, Ricardo Wurmus, Dilmurat Yusuf, Uwe Ohler
Published: over 5 years ago

Software Mentions 2

cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435