Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1598-7

https://doi.org/10.1186/s13059-018-1598-7

Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

Cited by: 38
Author(s): Ramya Raviram, Pedro P. Rocha, Vincent Luo, Emily Swanzey, Emily R. Miraldi, Edward B. Chuong, Cédric Feschotte, Richard Bonneau, Jane A. Skok
Published: almost 6 years ago

Software Mentions 3

bioconductor: Chicago
CHiCAGO: Capture Hi-C Analysis of Genomic Organization
Papers that mentioned: 13
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566