Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s13059-018-1596-9
https://doi.org/10.1186/s13059-018-1596-9
Comparison of computational methods for the identification of topologically associating domains
Cited by: 155
Author(s): Marie Zufferey, Daniele Tavernari, Elisa Oricchio, Giovanni Ciriello
Published: almost 6 years ago
Software Mentions 9
bioconductor: HiTC
High Throughput Chromosome Conformation Capture analysisPapers that mentioned: 21
cran: TopDom
An Efficient and Deterministic Method for Identifying Topological Domains in GenomesPapers that mentioned: 31
pypi: EAST
Text analysis library based on the Annotated Suffix Tree methodPapers that mentioned: 95
pypi: HiCExplorer
Set of programs to process, analyze and visualize Hi-C dataPapers that mentioned: 33
pypi: matryoshka
To cut small images from a original image in batch, just like the Matryoshka Dolls.Papers that mentioned: 2
pypi: spectral
Spectral Python (SPy) is a Python module for hyperspectral image processing.Papers that mentioned: 6