Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1582-2

https://doi.org/10.1186/s13059-018-1582-2

Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis

Cited by: 77
Author(s): Anna R. Poetsch, Simon J. Boulton, Nicholas M. Luscombe
Published: almost 6 years ago

Software Mentions 7

bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: ggbio
Visualization tools for genomic data
Papers that mentioned: 53
bioconductor: motifmatchr
Fast Motif Matching in R
Papers that mentioned: 5
bioconductor: rtracklayer
R interface to genome annotation files and the UCSC genome browser
Papers that mentioned: 107
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
pypi: plot
A matplotlib frontend executable using JSON file as user input
Papers that mentioned: 63