Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1510-5

https://doi.org/10.1186/s13059-018-1510-5

A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains

Cited by: 65
Author(s): Abdulrahman Salhab, Karl Nordström, Gilles Gasparoni, Kathrin Kattler, Peter Ebert, Fidel Ramírez, Laura Arrigoni, Fabian Müller, Julia K. Polansky, Cristina Cadenas, Jan G. Hengstler, Thomas Lengauer, Thomas Manke, Jörn Walter
Published: about 6 years ago

Software Mentions 3

bioconductor: MethylSeekR
Segmentation of Bis-seq data
Papers that mentioned: 33
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: HiCExplorer
Set of programs to process, analyze and visualize Hi-C data
Papers that mentioned: 33