Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1463-8

https://doi.org/10.1186/s13059-018-1463-8

Alternative DNA secondary structure formation affects RNA polymerase II promoter-proximal pausing in human

Cited by: 38
Author(s): Karol Szlachta, Ryan G. Thys, Naomi D Atkin, Levi C. T. Pierce, Stefan Bekiranov, Yuh‐Hwa Wang
Published: over 6 years ago

Software Mentions 3

cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: ViennaRNA
A library for the prediction and comparison of RNA secondary structures.
Papers that mentioned: 200