Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-017-1372-2

https://doi.org/10.1186/s13059-017-1372-2

DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition

Cited by: 30
Author(s): Jérôme Audoux, Philippe Naveilhan, Rayan Chikhi, Mikaël Salson, Mélina Gallopin, Marc Gabriel, Jérémy Le Coz, Emilie Drouineau, Thérèse Commes, Daniel Gautheret
Published: almost 7 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: kissDE
Retrieves Condition-Specific Variants in RNA-Seq Data
Papers that mentioned: 4
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759