Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-017-1367-z

https://doi.org/10.1186/s13059-017-1367-z

MICRA: an automatic pipeline for fast characterization of microbial genomes from high-throughput sequencing data

Cited by: 9
Author(s): Ségolène Caboche, Gaël Even, Alexandre Loywick, Christophe Audebert, David Hot
Published: almost 7 years ago

Software Mentions 6

bioconductor: MIRA
Methylation-Based Inference of Regulatory Activity
Papers that mentioned: 856
cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: Ion
Ion is an MVC Web Framework
Papers that mentioned: 368