Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-017-1209-z

https://doi.org/10.1186/s13059-017-1209-z

Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana

Cited by: 32
Author(s): Fernando A. Rabanal, Terezie Mandáková, Luz Mayela Soto‐Jiménez, Robert Greenhalgh, David L. Parrott, Stefan Lutzmayer, Joshua G. Steffen, Viktoria Nizhynska, Richard Mott, Martin A. Lysak, Richard M. Clark, Magnus Nordborg
Published: over 7 years ago

Software Mentions 3

pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: pysamstats
A Python utility for calculating statistics against genome position based on sequence alignments from a SAM, BAM or CRAM file.
Papers that mentioned: 17
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017