Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-016-1116-8

https://doi.org/10.1186/s13059-016-1116-8

IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses

Cited by: 112
Author(s): Shaman Narayanasamy, Yohan Jarosz, Emilie Muller, Anna Heintz‐Buschart, Malte Herold, Anne Kaysen, Cédric Christian Laczny, Nicolás Pinel, Patrick May, Paul Wilmes
Published: about 8 years ago

Software Mentions 4

cran: HMM
Hidden Markov Models
Papers that mentioned: 577
cran: IMP
Interactive Model Performance Evaluation
Papers that mentioned: 172
cran: Platypus
Single-Cell Immune Repertoire and Gene Expression Analysis
Papers that mentioned: 218
pypi: Platypus
A minimal language
Papers that mentioned: 218