Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-016-0932-1

https://doi.org/10.1186/s13059-016-0932-1

Single-cell analysis of long non-coding RNAs in the developing human neocortex

Cited by: 291
Author(s): Siyuan John Liu, Tomasz J. Nowakowski, Alex A. Pollen, Jan H. Lui, Max A. Horlbeck, Frank J. Attenello, Daniel He, Jonathan S. Weissman, Arnold R. Kriegstein, Aaron A. Diaz, Daniel A. Lim
Published: over 8 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017