Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-016-0930-3

https://doi.org/10.1186/s13059-016-0930-3

Beyond comparisons of means: understanding changes in gene expression at the single-cell level

Cited by: 89
Author(s): Catalina A. Vallejos, Sylvia Richardson, John C. Marioni
Published: over 8 years ago

Software Mentions 5

bioconductor: BASiCS
Bayesian Analysis of Single-Cell Sequencing data
Papers that mentioned: 21
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668