Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-015-0848-1

https://doi.org/10.1186/s13059-015-0848-1

Transcriptome-wide RNA processing kinetics revealed using extremely short 4tU labeling

Cited by: 59
Author(s): J. David Barrass, Jane E. A. Reid, Yuanhua Huang, Ralph D. Hector, Guido Sanguinetti, Jean D. Beggs, Sander Granneman
Published: almost 9 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: house
A lib to persist blobs by their sha256
Papers that mentioned: 960
pypi: pyCRAC
Python NextGen sequencing data processing software
Papers that mentioned: 29