Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-015-0675-4

https://doi.org/10.1186/s13059-015-0675-4

Extensive rewiring of epithelial-stromal co-expression networks in breast cancer

Cited by: 42
Author(s): Eunsun Oh, Stephen M Christensen, Sindhu Ghanta, Jong Cheol Jeong, Octavian Bucur, Benjamin Glass, Laleh Montaser‐Kouhsari, Nicholas W. Knoblauch, Nicholas Bertos, Sadiq M.I. Saleh, Benjamin Haibe‐Kains, Morag Park, Andrew H. Beck
Published: over 9 years ago

Software Mentions 7

bioconductor: RedeR
Interactive visualization and manipulation of nested networks
Papers that mentioned: 21
bioconductor: SANTA
Spatial Analysis of Network Associations
Papers that mentioned: 7
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: knitr
A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157
cran: MatrixEQTL
Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
Papers that mentioned: 81
cran: mclust
Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
Papers that mentioned: 297
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555