Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-015-0604-6

https://doi.org/10.1186/s13059-015-0604-6

DGEclust: differential expression analysis of clustered count data

Cited by: 14
Author(s): Dimitrios V Vavoulis, Margherita Francescatto, Peter Heutink, Julian Gough
Published: over 9 years ago

Software Mentions 5

bioconductor: baySeq
Empirical Bayesian analysis of patterns of differential expression in count data
Papers that mentioned: 139
bioconductor: compcodeR
RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods
Papers that mentioned: 11
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
pypi: DGEclust
Hierarchical non-parametric Bayesian clustering of digital expression data
Papers that mentioned: 2