Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-014-0555-3

https://doi.org/10.1186/s13059-014-0555-3

Determining the quality and complexity of next-generation sequencing data without a reference genome

Cited by: 27
Author(s): Seyed Yahya Anvar, Lusine Khachatryan, Martijn Vermaat, M.A. van Galen, Irina Pulyakhina, Yavuz Ariyürek, Ken Kraaijeveld, Johan T. den Dunnen, Peter de Knijff, Peter A C ‘t Hoen, Jeroen F. J. Laros
Published: almost 10 years ago

Software Mentions 4

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: khmer
khmer k-mer counting library
Papers that mentioned: 110
pypi: kPAL
k-mer analysis toolkit and programming library.
Papers that mentioned: 1