Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13029-015-0040-8

https://doi.org/10.1186/s13029-015-0040-8

TRX-LOGOS - a graphical tool to demonstrate DNA information content dependent upon backbone dynamics in addition to base sequence

Cited by: 3
Author(s): Connor H. Fortin, Katharina Schulze, Gregory A. Babbitt
Published: about 9 years ago

Software Mentions 4

bioconductor: seqLogo

Sequence logos for DNA sequence alignments
Papers that mentioned: 24

cran: fasta

Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848

cran: JASPAR

R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283

pypi: fasta

The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848