Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13007-019-0440-x

https://doi.org/10.1186/s13007-019-0440-x

Comparing time series transcriptome data between plants using a network module finding algorithm

Cited by: 6
Author(s): Jiyoung Lee, Lenwood S. Heath, Ruth Grene, Song Li
Published: over 5 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: bash
Bash for Python
Papers that mentioned: 65
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: linux

Papers that mentioned: 450
pypi: mkdir
mkdir
Papers that mentioned: 2