Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12967-020-02247-6

https://doi.org/10.1186/s12967-020-02247-6

CLEAR: coverage-based limiting-cell experiment analysis for RNA-seq

Cited by: 12
Author(s): Logan A. Walker, Michael G. Sovic, Chi‐Ling Chiang, Eileen Hu, Jiyeon K. Denninger, Xi Chen, Elizabeth D. Kirby, John C. Byrd, Natarajan Muthusamy, Ralf Bundschuh, Pearlly S. Yan
Published: almost 5 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366