Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12935-020-01362-0

https://doi.org/10.1186/s12935-020-01362-0

Immune-related long non-coding RNA signature identified prognosis and immunotherapeutic efficiency in bladder cancer (BLCA)

Cited by: 40
Author(s): Rui Cao, Lushun Yuan, Bo Ma, Gang Wang, Ye Tian
Published: over 4 years ago

Software Mentions 13

bioconductor: clusterProfiler

A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

cran: forestplot

Advanced Forest Plot Using 'grid' Graphics
Papers that mentioned: 146

cran: glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607

cran: nomogramEx

Extract Equations from a Nomogram
Papers that mentioned: 27

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: regplot

Enhanced Regression Nomogram Plot
Papers that mentioned: 49

cran: rms

Regression Modeling Strategies
Papers that mentioned: 1,236

cran: survivalROC

Time-Dependent ROC Curve Estimation from Censored Survival Data
Papers that mentioned: 479

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

pypi: gene

gene
Papers that mentioned: 185

pypi: glmnet

Python wrapper for glmnet
Papers that mentioned: 1,607

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893