Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12920-015-0095-z

https://doi.org/10.1186/s12920-015-0095-z

OncoRep: an n-of-1 reporting tool to support genome-guided treatment for breast cancer patients using RNA-sequencing

Cited by: 11
Author(s): Tobias Meißner, Kathleen Fisch, Louis Gioia, Andrew I. Su
Published: over 9 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
cran: knitr
A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157