Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12915-020-00863-8

https://doi.org/10.1186/s12915-020-00863-8

Functional signatures of evolutionarily young CTCF binding sites

Cited by: 7
Author(s): Dhoyazan Azazi, Jonathan M. Mudge, Duncan T. Odom, Paul Flicek
Published: about 4 years ago

Software Mentions 8

bioconductor: apeglm
Approximate posterior estimation for GLM coefficients
Papers that mentioned: 41
bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: CAST
'caret' Applications for Spatial-Temporal Models
Papers that mentioned: 219
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: Rat
Resevoir Monitoring using Satellite Remote Sensing
Papers that mentioned: 3