Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12915-017-0419-x

https://doi.org/10.1186/s12915-017-0419-x

Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination

Cited by: 95
Author(s): Muluneh Tamiru, Satoshi Natsume, Hiroki Takagi, Ben White, Hiroki Yaegashi, Mitsuru Shimizu, Kentaro Yoshida, Aiko Uemura, Kanta Oikawa, Akira Abe, Naoya Urasaki, Hideo Matsumura, Babil Pachakkil, Shinşuke Yamanaka, Ryo Matsumoto, Satoru Muranaka, Gezahegn Girma, Antonio Lopez-Montes, Melaku Gedil, Ranjana Bhattacharjee, Michael T. Abberton, P. Lava Kumar, Ismail Rabbi, Mai Tsujimura, Toru Terachi, Wilfried Haerty, Manuel Corpas, Sophien Kamoun, Günter Kahl, H. Takagi, Robert Asiedu, Ryohei Terauchi
Published: over 7 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017