Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12885-021-07788-7

https://doi.org/10.1186/s12885-021-07788-7

Comprehensive analysis of genomic mutation signature and tumor mutation burden for prognosis of intrahepatic cholangiocarcinoma

Cited by: 14
Author(s): Rui Zhang, Qi Li, Jiao Fu, Z C Jin, Jingbo Su, Jian Zhang, Chen Chen, Zhimin Geng, Dong Zhang
Published: almost 4 years ago

Software Mentions 12

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: enrichplot
Visualization of Functional Enrichment Result
Papers that mentioned: 249
bioconductor: GenVisR
Genomic Visualizations in R
Papers that mentioned: 54
bioconductor: karyoploteR
Plot customizable linear genomes displaying arbitrary data
Papers that mentioned: 50
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690