Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12885-019-5592-6
https://doi.org/10.1186/s12885-019-5592-6
A TMEFF2-regulated cell cycle derived gene signature is prognostic of recurrence risk in prostate cancer
Cited by: 10
Author(s): Constantin Georgescu, Joshua M. Corbin, Sandra Thibivilliers, Zachary D. Webb, Yan Zhao, Jan Koster, Kar‐Ming Fung, Adam S. Asch, Jonathan D. Wren, Maria J. Ruiz-Echevarría
Published: over 5 years ago
Software Mentions 3
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: SigCheck
Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadataPapers that mentioned: 1
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.Papers that mentioned: 307