Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12866-015-0497-2
https://doi.org/10.1186/s12866-015-0497-2
Cilantro microbiome before and after nonselective pre-enrichment for Salmonella using 16S rRNA and metagenomic sequencing
Cited by: 49
Author(s): Karen G. Jarvis, James R. White, Christopher J. Grim, Laura Ewing, Andrea Ottesen, Junia Jean Gilles Beaubrun, James B. Pettengill, Eric W. Brown, Darcy E. Hanes
Published: over 9 years ago
Software Mentions 3
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306