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Papers: 10.1186/s12864-021-07974-8

https://doi.org/10.1186/s12864-021-07974-8

SCReadCounts: estimation of cell-level SNVs expression from scRNA-seq data

Cited by: 8
Author(s): N M Prashant, Nawaf Alomran, Yu Chen, Hongyu Liu, Pavlos Bousounis, Mercedeh Movassagh, Nathan Edwards, Anélia Horvath
Published: almost 4 years ago

Software Mentions 6

bioconductor: SingleR
Reference-Based Single-Cell RNA-Seq Annotation
Papers that mentioned: 97
Very Likely Science (100)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
Very Likely Science (100)
pypi: pysam
Package for reading, manipulating, and writing genomic data
Papers that mentioned: 130
Very Likely Science (100)
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
Very Likely Science (100)