Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-020-6714-x

https://doi.org/10.1186/s12864-020-6714-x

DolphinNext: a distributed data processing platform for high throughput genomics

Cited by: 61
Author(s): Onur Yukselen, Osman Turkyilmaz, Ahmet Öztürk, Manuel Garber, Alper Küçükural
Published: over 4 years ago

Software Mentions 6

cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: ci
Easily run common CI tasks for Python builds.
Papers that mentioned: 5
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: nf-core
Helper tools for use with nf-core Nextflow pipelines.
Papers that mentioned: 18
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366