Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-020-6502-7

https://doi.org/10.1186/s12864-020-6502-7

Choice of library size normalization and statistical methods for differential gene expression analysis in balanced two-group comparisons for RNA-seq studies

Cited by: 23
Author(s): Xiaohong Li, Nigel G. F. Cooper, Timothy E. O’Toole, Eric C. Rouchka
Published: almost 5 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: maSigPro
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
Papers that mentioned: 119
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: voom
A python message bus that you can put 4 million volts through.
Papers that mentioned: 136