Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-020-07358-4

https://doi.org/10.1186/s12864-020-07358-4

Systematic comparison of high-throughput single-cell RNA-seq methods for immune cell profiling

Cited by: 33
Author(s): Tracy M. Yamawaki, Daniel Lu, Daniel C. Ellwanger, Dev Bhatt, Paolo Manzanillo, Vanessa Arias, Hong Zhou, Oh Kyu Yoon, Oliver Homann, Songli Wang, Chi-Ming Li
Published: almost 4 years ago

Software Mentions 6

bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213