Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-6444-0

https://doi.org/10.1186/s12864-019-6444-0

The transcriptome of Pinus pinaster under Fusarium circinatum challenge

Cited by: 18
Author(s): Laura Hernandez‐Escribano, Erik A. Visser, Eugenia Iturritxa, Rosa Raposo, Sanushka Naidoo
Published: almost 5 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: Mercator
Clustering and Visualizing Distance Matrices
Papers that mentioned: 347
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819