Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-6427-1

https://doi.org/10.1186/s12864-019-6427-1

Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

Cited by: 44
Author(s): Narayan Nicole, Thomas Weinmaier, Emilio J Laserna-Mendieta, Marcus J. Claesson, Fergus Shanahan, Karim Dabbagh, Shoko Iwai, Todd Z. DeSantis
Published: almost 5 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: qiime
Quantitative Insights Into Microbial Ecology
Papers that mentioned: 157