Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-6426-2

https://doi.org/10.1186/s12864-019-6426-2

Custom selected reference genes outperform pre-defined reference genes in transcriptomic analysis

Cited by: 17
Author(s): Karen Cristine Gonçalves dos Santos, Isabel Desgagné‐Penix, Hugo Germain
Published: over 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
pypi: custom
Custom self carry
Papers that mentioned: 1,363
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017