Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-5723-0

https://doi.org/10.1186/s12864-019-5723-0

BacTag - a pipeline for fast and accurate gene and allele typing in bacterial sequencing data based on database preprocessing

Cited by: 2
Author(s): Lusine Khachatryan, M. E. M. Kraakman, A.T. Bernards, Jeroen F. J. Laros
Published: over 5 years ago

Software Mentions 3

pypi: fastools
FASTA/FASTQ analysis and manipulation toolkit.
Papers that mentioned: 1
pypi: sim-reads
Generate simulated reads.
Papers that mentioned: 1
pypi: stringMLST
Fast k-mer based tool for alignment and assembly-free multi locus sequence typing (MLST) directly from genome sequencing reads.
Papers that mentioned: 11