Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-5613-5

https://doi.org/10.1186/s12864-019-5613-5

Conserved and specific features of Streptococcus pyogenes and Streptococcus agalactiae transcriptional landscapes

Cited by: 25
Author(s): Isabelle Rosinski‐Chupin, Elisabeth Sauvage, Agnès Fouet, Claire Poyart, Philippe Glaser
Published: over 5 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575