Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-018-4649-2

https://doi.org/10.1186/s12864-018-4649-2

Identification and characterization of functional modules reflecting transcriptome transition during human neuron maturation

Cited by: 15
Author(s): Zhisong He, Qianhui Yu
Published: over 6 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GOSemSim
GO-terms Semantic Similarity Measures
Papers that mentioned: 118
bioconductor: topGO
Enrichment Analysis for Gene Ontology
Papers that mentioned: 652
bioconductor: TSCAN
Tools for Single-Cell Analysis
Papers that mentioned: 49
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607