Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-017-4294-1

https://doi.org/10.1186/s12864-017-4294-1

Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes

Cited by: 44
Author(s): Bhavya Papudeshi, John M. Haggerty, Michael P. Doane, Megan M. Morris, Kevin Walsh, Douglas T. Beattie, Dnyanada Pande, Parisa Zaeri, Genivaldo G. Z. Silva, Fabiano L. Thompson, Robert A. Edwards, Elizabeth A. Dinsdale
Published: almost 7 years ago

Software Mentions 4

cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
pypi: GroopM
Metagenomic binning suite
Papers that mentioned: 32
pypi: merger
Package used for merging branches, squashing them and saying who reviewed them
Papers that mentioned: 7