Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-017-4167-7

https://doi.org/10.1186/s12864-017-4167-7

SaVanT: a web-based tool for the sample-level visualization of molecular signatures in gene expression profiles

Cited by: 30
Author(s): David Lopez, Dennis Montoya, Michael Ambrose, Larry Lam, Leah Briscoe, Claire Adams, Robert L. Modlin, Matteo Pellegrini
Published: about 7 years ago

Software Mentions 7

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: frma
Frozen RMA and Barcode
Papers that mentioned: 26
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: heatmaps
Flexible Heatmaps for Functional Genomics and Sequence Features
Papers that mentioned: 3
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: heatmaps
Papers that mentioned: 3