Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-016-3118-z

https://doi.org/10.1186/s12864-016-3118-z

Web-based bioinformatics workflows for end-to-end RNA-seq data computation and analysis in agricultural animal species

Cited by: 10
Author(s): Weizhong Li, René Richter, Yunsup Jung, Quanyin Zhu, Robert W. Li
Published: about 8 years ago

Software Mentions 5

cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: StarCluster
StarCluster is a utility for creating and managing computing clusters hosted on Amazon's Elastic Compute Cloud (EC2).
Papers that mentioned: 23
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017