Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-016-2746-7

https://doi.org/10.1186/s12864-016-2746-7

Transcriptome analysis of human brain tissue identifies reduced expression of complement complex C1Q Genes in Rett syndrome

Cited by: 34
Author(s): Peijie Lin, Laura Nicholls, Hassan Assareh, Zhiming Fang, Timothy G. Amos, Richard J. Edwards, Amelia A. Assareh, Irina Voineagu
Published: over 8 years ago

Software Mentions 6

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing data
Papers that mentioned: 331
cran: ruv
Detect and Remove Unwanted Variation using Negative Controls
Papers that mentioned: 4
pypi: ruv
Command line interface for RUV (http://www.ruv.is)
Papers that mentioned: 4
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017