Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-015-2007-1

https://doi.org/10.1186/s12864-015-2007-1

Optimizing and benchmarking de novo transcriptome sequencing: from library preparation to assembly evaluation

Cited by: 77
Author(s): Yuichiro Hara, Kaori Tatsumi, Michio Yoshida, Eriko Kajikawa, Hiroshi Kanazawa, Shigehiro Kuraku
Published: almost 9 years ago

Software Mentions 2

pypi: Assembly
Assembly is a pythonic object-oriented, mid stack, batteries included framework built on Flask, that adds structure to your Flask application, and group your routes by class.Assembly allows developers to build web applications in much the same way they would build any other object-oriented Python program.Assembly Makes Flask Great Again!
Papers that mentioned: 147
pypi: khmer
khmer k-mer counting library
Papers that mentioned: 110