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Papers: 10.1186/s12859-021-04114-7

https://doi.org/10.1186/s12859-021-04114-7

Streamlining differential exon and 3′ UTR usage with diffUTR

Cited by: 3
Author(s): Stefan Gerber, Gerhard Schratt, Pierre-Luc Germain
Published: over 4 years ago

Software Mentions 8

bioconductor: APAlyzer
A toolkit for APA analysis using RNA-seq data
Papers that mentioned: 4
Very Likely Science (100)
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
Very Likely Science (100)
bioconductor: diffUTR
diffUTR: Streamlining differential exon and 3' UTR usage
Papers that mentioned: 1
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
Very Likely Science (90)
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Very Likely Science (90)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)