Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-021-04114-7

https://doi.org/10.1186/s12859-021-04114-7

Streamlining differential exon and 3′ UTR usage with diffUTR

Cited by: 3
Author(s): Stefan Gerber, Gerhard Schratt, Pierre-Luc Germain
Published: over 3 years ago

Software Mentions 8

bioconductor: APAlyzer
A toolkit for APA analysis using RNA-seq data
Papers that mentioned: 4
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: diffUTR
diffUTR: Streamlining differential exon and 3' UTR usage
Papers that mentioned: 1
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759