Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-3416-y

https://doi.org/10.1186/s12859-020-3416-y

Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes

Cited by: 12
Author(s): Michelle L. Treiber, Diana H. Taft, Ian F Korf, David A. Mills, Danielle G. Lemay
Published: over 4 years ago

Software Mentions 5

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

cran: fasta

Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848

pypi: custom

Custom self carry
Papers that mentioned: 1,363

pypi: fasta

The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848